Commit fdb3dd6e authored by Femi Kadri's avatar Femi Kadri

modified chain script

parent 208e8e09
......@@ -158,7 +158,7 @@ else
echo 'LST_surv_dist_time_rxn_bin_old.txt'
rm -irf LST_surv_dist_time_rxn_bin_old.txt
echo 'LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST*_err.txt *LST*_out.txt'
rm -irf LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST*_err.txt *LST*_out.txt
rm -irf LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST*_stderr.txt *LST*_stdout.txt
echo 'results/LST*count*.txt'
rm -irf results/LST*count*.txt
echo 'removed old LST files'
......
......@@ -22,6 +22,8 @@
# Secondly,use full path of chain script "lsf_chain.tcsh".E.g./scratch/kasperone1/lbm/lbm2/lbm_1/lsf_chain.tcsh
# Then run as follows replacing "/scratch/kasperone1/lbm/lbm2/lbm_1" with your full path of directory containing your chain script:
# nohup /scratch/kasperone1/lbm/lbm2/lbm_1/lsf_chain.tcsh schooner 6 >& lsf_chain_output.txt &
# nohup $PWD'/lsf_chain.tcsh' schooner 6 >& lsf_chain_output.txt & #cluster name is schooner OR
# nohup $(pwd)'/lsf_chain.tcsh' stampede 6 >& lsf_chain_output.txt &
# The first aliasing is not needed if running job in a bash shell.
# nohup lsf_chain.tcsh ... >&! lsf_chain_whatever_output.txt &
# nohup lsf_chain.tcsh sooner 500 >&! lsf_chain_whatever_output.txt &
......
......@@ -160,7 +160,7 @@ else
echo 'LST_surv_dist_time_rxn_bin_old.txt'
rm -irf LST_surv_dist_time_rxn_bin_old.txt
echo 'LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST*_err.txt *LST*_out.txt'
rm -irf LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST*_err.txt *LST*_out.txt
rm -irf LST_Time_Steps_Prev_Completed.txt perform_lagrangian_tracking.dat *LST_**.err *LST_**.out
echo 'results/LST*count*.txt'
rm -irf results/LST*count*.txt
echo 'removed old LST files'
......
......@@ -25,6 +25,10 @@
# Then run as follows replacing "/scratch/kasperone1/lbm/lbm2/lbm_1/lbm.git" with your full path of directory containing your chain script:
# nohup /work/02948/kasperon/lbm_chainrun/lsf_chain1.tcsh stampede 6 >& lsf_chain_output.txt &
##### nohup /scratch/kasperone1/lbm/lbm2/lbm_1/lsf_chain1.tcsh schooner 6 >& lsf_chain_output.txt &
# OR better still use environment variables.In this case however,you need to run the nohup command in the directory containing the chain script
# and all the other program files.In this case,run as:
# nohup $PWD'/lsf_chain.tcsh' schooner 6 >& lsf_chain_output.txt & #cluster name is schooner OR
# nohup $(pwd)'/lsf_chain.tcsh' stampede 6 >& lsf_chain_output.txt &
# The first aliasing is not needed if running job in a bash shell.
# nohup lsf_chain.tcsh ... >&! lsf_chain_whatever_output.txt &
# nohup lsf_chain.tcsh sooner 500 >&! lsf_chain_whatever_output.txt &
......
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